CDS

Accession Number TCMCG006C51127
gbkey CDS
Protein Id XP_013730466.1
Location join(98820..99071,99239..99388,99476..99532,99636..99734,99844..99939,100027..100111,100194..100246,100330..100413,100495..100605,100795..100860)
Gene LOC106434179
GeneID 106434179
Organism Brassica napus

Protein

Length 350aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013875012.2
Definition ribosomal RNA small subunit methyltransferase, chloroplastic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000179        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008170        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008174        [VIEW IN EMBL-EBI]
GO:0008649        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016422        [VIEW IN EMBL-EBI]
GO:0016433        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080009        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140102        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTGTGGTGGTAACAATAACATCAACCATCAATTCCTCGCGGGTTCCGTCATGGATGAACAACAACGGAGACAGTTCTCCCTCACTGAGGGAAACCTTGGCCTCTTTCTCAAGGAGGAGCTCAAATATATCTCTTTTGAGGAACAAGAAGAAGGTGTGTTGCGGCGCGAAGAGCACAGATGATGATTACCACGCAACCATCAAATCACTCAATTCTCGAGGCCGCTTTCCCAGAAAATCCCTTGGGCAGCATTACATGCTGAATTCGGACATAAACGATCAGCTAGCGGCAGCGGCTAAAGTGAAAGAAGGAGATTTTGTATTAGAGATAGGACCTGGGACTGGCTCTTTGACCAATGTTCTTCTCAACTTAGGTGCTTCTGTTCTTGCCATCGACAAGGATCCTCATATGGTGGATTTGGTGAGAGAAAGATTCGCAGGTTCCGACAAGTTCAAGGTTTTGCATGAGGATTTTGTCAAGTCTCACATCCGTTCTCACATGCTCTCCTTTTTAGAGACTAGAAACTTATCTCATCCTGATTTTGCTCTTGCAAAGGTTGTGTCCAACTTACCTTTTAATATAAGTACTGATGTTGTCAAGCTTCTTCTTCCTATGGGTGACATTTTCTCTCACGTTGTTCTCTTACTCCAGGATGAGGCAGCTTTGCGATTGGTTGAGCCAGCTTTGCGAACATCTGAATACCGACCCATCAACATTTTGGTCAACTTCTATTCTGAACCGGAATACAATTTCAGAGTTCCTAGGGAGAACTTCTTCCCTCGGCCCAAGGTTGATGCAGCTGTTGTAACATTCAAACTAAAGCATCCGAGGGACTATCCCGATGTCTCGTCCACCAAAAGTTTCTTCTCTTTGGTGAATTCTGCATTCAATGGGAAGAGAAAAATGTTAAGAAAGTCACTCCAGCACCTATCGTCATCTCCAGAGATCGAGAAAGCTCTTGGAGTAGCAGGTCTTCCAGTCACTTCGAGGCCAGAAGAGCTTACGCTGGGTGACTTTGTCAAGTTGCATAATGTAATAGGCAGAGAATAG
Protein:  
MSVVVTITSTINSSRVPSWMNNNGDSSPSLRETLASFSRRSSNISLLRNKKKVCCGAKSTDDDYHATIKSLNSRGRFPRKSLGQHYMLNSDINDQLAAAAKVKEGDFVLEIGPGTGSLTNVLLNLGASVLAIDKDPHMVDLVRERFAGSDKFKVLHEDFVKSHIRSHMLSFLETRNLSHPDFALAKVVSNLPFNISTDVVKLLLPMGDIFSHVVLLLQDEAALRLVEPALRTSEYRPINILVNFYSEPEYNFRVPRENFFPRPKVDAAVVTFKLKHPRDYPDVSSTKSFFSLVNSAFNGKRKMLRKSLQHLSSSPEIEKALGVAGLPVTSRPEELTLGDFVKLHNVIGRE